SourceReference

CaCORE::Common::Provenance::SourceReference - Perl extension for SourceReference.

Abstract

The CaCORE::Common::Provenance::SourceReference is a Perl object representation of the caBIO SourceReference object.

Description

A reference (an electronic reference, publication citation, etc.) to the untransformed data at a source.

Attributes of SourceReference

The following are all the attributes of the SourceReference object and their data types:

sourceReferenceType

data type: string

id

data type: long

reference

data type: string

  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of SourceReference

The following are all the objects that are associated with the SourceReference:

Provenance:

One to many assoication, use getProvenanceCollection to get a collection of associated Provenance.

  End Associations and related methods


Source

CaCORE::Common::Provenance::Source - Perl extension for Source.

Abstract

The CaCORE::Common::Provenance::Source is a Perl object representation of the caBIO Source object.

Description

An abstract class representing a source. Will be subclassed into a variety of specialized classes.

Attributes of Source

The following are all the attributes of the Source object and their data types:

name

data type: string

id

data type: long

  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Source

The following are all the objects that are associated with the Source:

  End Associations and related methods


Provenance

CaCORE::Common::Provenance::Provenance - Perl extension for Provenance.

Abstract

The CaCORE::Common::Provenance::Provenance is a Perl object representation of the caBIO Provenance object.

Description

A record describing the source of an assertion (datum) contained in an object.

Attributes of Provenance

The following are all the attributes of the Provenance object and their data types:

transformation

data type: string

evidenceCode

data type: string

id

data type: long

  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Provenance

The following are all the objects that are associated with the Provenance:

SourceReference:

Many to one assoication, use getSourceReference to get the associated SourceReference.

OriginalSource:

Many to one assoication, use getOriginalSource to get the associated OriginalSource.

ImmediateSource:

Many to one assoication, use getImmediateSource to get the associated ImmediateSource.

SupplyingSource:

Many to one assoication, use getSupplyingSource to get the associated SupplyingSource.

  End Associations and related methods


URLSourceReference

CaCORE::Common::Provenance::URLSourceReference - Perl extension for URLSourceReference.

Abstract

The CaCORE::Common::Provenance::URLSourceReference is a Perl object representation of the caBIO URLSourceReference object.

Description

An implementation of the abstract SourceReference that contains a URL to the original information.

Attributes of URLSourceReference

The following are all the attributes of the URLSourceReference object and their data types:

sourceURL

data type: string

  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of URLSourceReference

The following are all the objects that are associated with the URLSourceReference:

  End Associations and related methods


PublicationSource

CaCORE::Common::Provenance::PublicationSource - Perl extension for PublicationSource.

Abstract

The CaCORE::Common::Provenance::PublicationSource is a Perl object representation of the caBIO PublicationSource object.

Description

An implementing subclass of Source. Describes a source for which an electronic online version is not available, but for which a printed version of the data is available.

Attributes of PublicationSource

The following are all the attributes of the PublicationSource object and their data types:

volume

data type: int

endPage

data type: int

year

data type: int

title

data type: string

startPage

data type: int

authors

data type: string

  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of PublicationSource

The following are all the objects that are associated with the PublicationSource:

  End Associations and related methods


ResearchInstitutionSource

CaCORE::Common::Provenance::ResearchInstitutionSource - Perl extension for ResearchInstitutionSource.

Abstract

The CaCORE::Common::Provenance::ResearchInstitutionSource is a Perl object representation of the caBIO ResearchInstitutionSource object.

Description

An implementing subclass of Source that describes a research institution (commercial, academic, or government). This is used for information with attribution, but that lack an online electronic format.

Attributes of ResearchInstitutionSource

The following are all the attributes of the ResearchInstitutionSource object and their data types:

institutionPersons

data type: string

institutionAddress

data type: string

institutionDepartment

data type: string

institutionName

data type: string

  End Attributes

  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of ResearchInstitutionSource

The following are all the objects that are associated with the ResearchInstitutionSource:

  End Associations and related methods


WebServicesSourceReference

CaCORE::Common::Provenance::WebServicesSourceReference - Perl extension for WebServicesSourceReference.

Abstract

The CaCORE::Common::Provenance::WebServicesSourceReference is a Perl object representation of the caBIO WebServicesSourceReference object.

Description

Attributes of WebServicesSourceReference

The following are all the attributes of the WebServicesSourceReference object and their data types:

request

data type: string

  End Attributes

  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of WebServicesSourceReference

The following are all the objects that are associated with the WebServicesSourceReference:

  End Associations and related methods


InternetSource

CaCORE::Common::Provenance::InternetSource - Perl extension for InternetSource.

Abstract

The CaCORE::Common::Provenance::InternetSource is a Perl object representation of the caBIO InternetSource object.

Description

Attributes of InternetSource

The following are all the attributes of the InternetSource object and their data types:

ownerInstitution

data type: string

sourceURI

data type: string

ownerPersons

data type: string

  End Attributes

  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of InternetSource

The following are all the objects that are associated with the InternetSource:

  End Associations and related methods